Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mucb/rseb c-terminal domain-containing protein | X808_RS06935 | Not Available | - | 1470381 - 1471355 | 37593.8 |
| sigma-e factor negative regulatory protein | X808_RS06940 | Not Available | - | 1471526 - 1472128 | 22351.3 |
| rna polymerase sigma factor rpoe | X808_RS06945 | Not Available | - | 1472176 - 1472748 | 21807.9 |
| 2-isopropylmalate synthase | X808_RS06950 | Not Available | - | 1472985 - 1474529 | 55824.8 |
| cof-type had-iib family hydrolase | X808_RS06955 | Not Available | + | 1475025 - 1475840 | 30288.3 |
| efflux rnd transporter periplasmic adaptor subunit | X808_RS06960 | Not Available | + | 1475900 - 1477063 | 41925.6 |
| bile acid:sodium symporter family protein | X808_RS06965 | Not Available | - | 1477160 - 1478104 | 33898.7 |
| 5'-nucleotidase, lipoprotein e(p4) family | X808_RS06970 | Not Available | + | 1478247 - 1479068 | 30771.1 |
| aminopeptidase pepb | X808_RS06975 | Not Available | + | 1479219 - 1480499 | 45919.4 |
| transcription elongation factor greb | X808_RS06980 | Not Available | + | 1480550 - 1481032 | 18654.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.