Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ycek/yidq family lipoprotein | X808_RS05940 | Not Available | + | 1252530 - 1252760 | 8193.4 |
| oligopeptide/dipeptide abc transporter atp-binding protein | X808_RS05945 | Not Available | - | 1252803 - 1253849 | 39506.1 |
| abc transporter permease subunit | X808_RS05950 | Not Available | - | 1253897 - 1254790 | 33700.3 |
| abc transporter permease subunit | X808_RS05955 | Not Available | - | 1254777 - 1255742 | 36149.2 |
| abc transporter substrate-binding protein | X808_RS05960 | Not Available | - | 1255745 - 1257454 | 64240.3 |
| sigma 54-interacting transcriptional regulator | X808_RS05965 | Not Available | - | 1257447 - 1258409 | 36154.1 |
| d-sedoheptulose 7-phosphate isomerase | X808_RS05970 | Not Available | + | 1258592 - 1259176 | 21404.9 |
| ycgn family cysteine cluster protein | X808_RS05975 | Not Available | - | 1259216 - 1259668 | 17599.0 |
| ybjq family protein | X808_RS05980 | Not Available | - | 1259670 - 1259990 | 11182.7 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | X808_RS05985 | Not Available | - | 1259990 - 1260586 | 21780.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.