Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| siderophore abc transporter substrate-binding protein | X808_RS05495 | Not Available | + | 1167698 - 1168597 | 32564.2 |
| abc transporter permease | X808_RS05500 | Not Available | + | 1168685 - 1169653 | 35079.5 |
| iron chelate uptake abc transporter family permease subunit | X808_RS05505 | Not Available | + | 1169685 - 1170584 | 33105.1 |
| abc transporter atp-binding protein | X808_RS05510 | Not Available | + | 1170596 - 1171354 | 28236.5 |
| php domain-containing protein | X808_RS05515 | Not Available | - | 1171392 - 1172210 | 30424.4 |
| dna glycosylase | X808_RS05520 | Not Available | - | 1172212 - 1172817 | 23106.0 |
| exodeoxyribonuclease i | X808_RS05525 | Not Available | - | 1172814 - 1174361 | 59121.2 |
| helix-turn-helix domain-containing protein | X808_RS05530 | Not Available | - | 1174874 - 1175161 | 10657.0 |
| type ii toxin-antitoxin system rele/pare family toxin | X808_RS05535 | Not Available | - | 1175136 - 1175471 | 12875.8 |
| asparagine--trna ligase | X808_RS05540 | Not Available | + | 1175950 - 1177353 | 52682.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.