Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose isomerase | X808_RS05300 | Not Available | - | 1118714 - 1119301 | 21135.1 |
| lysr substrate-binding domain-containing protein | X808_RS05305 | Not Available | + | 1119331 - 1120158 | 31143.5 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | X808_RS05310 | Not Available | - | 1120251 - 1122602 | 87155.0 |
| abc transporter six-transmembrane domain-containing protein | X808_RS05315 | Not Available | + | 1122772 - 1123548 | 28961.7 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | X808_RS05320 | Not Available | - | 1123643 - 1126249 | 94388.4 |
| nadp-dependent isocitrate dehydrogenase | X808_RS05325 | Not Available | - | 1126271 - 1127518 | 45510.9 |
| citrate synthase | X808_RS05330 | Not Available | + | 1127729 - 1129009 | 48227.2 |
| dead/deah box helicase | X808_RS11165 | Not Available | - | 1129080 - 1131716 | 100528.0 |
| site-specific dna-methyltransferase | X808_RS10875 | Not Available | - | 1131731 - 1133323 | 60552.8 |
| hypothetical protein | X808_RS05350 | Not Available | - | 1133235 - 1133423 | 7086.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.