Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zn-ribbon-containing protein | X808_RS04955 | Not Available | + | 1039595 - 1040350 | 29126.4 |
| l-cystine transporter | X808_RS04960 | Not Available | + | 1040453 - 1041778 | 46861.9 |
| nad(p)h-dependent oxidoreductase | X808_RS04965 | Not Available | - | 1041832 - 1042494 | 25603.7 |
| phenylalanine--trna ligase subunit alpha | X808_RS04970 | Not Available | + | 1042721 - 1043704 | 37046.3 |
| phenylalanine--trna ligase subunit beta | X808_RS04975 | Not Available | + | 1043764 - 1046151 | 86231.7 |
| integration host factor subunit alpha | X808_RS04980 | Not Available | + | 1046210 - 1046515 | 11356.6 |
| nlpc/p60 family protein | X808_RS04985 | Not Available | + | 1046542 - 1047066 | 19474.3 |
| outer membrane-stress sensor serine endopeptidase degs | X808_RS04990 | Not Available | + | 1047081 - 1048124 | 36987.7 |
| (d)cmp kinase | X808_RS04995 | Not Available | + | 1048134 - 1048808 | 24509.4 |
| 30s ribosomal protein s1 | X808_RS05000 | Not Available | + | 1048902 - 1050569 | 60234.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.