Salinicoccus sediminis str. SV-16

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Salinicoccus

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusSalinicoccus
SpeciesSalinicoccus sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinicoccus sediminis str. SV-16

Accession NumberLAYZ00000000.1

Gene Summary

Adenine Count

664934 bp

Thymine Count

664262 bp

Guanine Count

626373 bp

Cytosine Count

635715 bp

Genome Length

2591284 bp

Protein-coding Genes

2489 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
membrane proteinWN59_04910Not Available-937385 - 93872849010.6
n-acetyl-l,l-diaminopimelate aminotransferaseWN59_04915Not Available+938844 - 94000743579.9
d-mannonate oxidoreductaseWN59_04925O34896-941707 - 94255830408.2
mannonate dehydrataseWN59_04930Q5WKD5-942555 - 94362841113.3
alcohol dehydrogenaseWN59_04935O35045-943647 - 94466336719.8
c4-dicarboxylate abc transporter permeaseWN59_04940Q9KR66-944682 - 94595644427.8
trap-type transport system permease small proteinWN59_04945Not Available-945953 - 94643818675.2
c4-dicarboxylate abc transporterWN59_04950Q16BC9-946435 - 94740636411.0
gntr family transcriptional regulatorWN59_04955P0ACM2-947468 - 94814226258.4
ureidoglycolate dehydrogenaseWN59_04960O34736+948231 - 94924436570.6

Displaying genes 961 – 970 of 2562 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

167 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 167 metabolites