Companilactobacillus kimchii DSM 13961 = JCM 10707

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Companilactobacillus

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusCompanilactobacillus
SpeciesCompanilactobacillus kimchii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Companilactobacillus kimchii DSM 13961 = JCM 10707

Accession NumberAZDH00000000.1

Gene Summary

Adenine Count

888311 bp

Thymine Count

893472 bp

Guanine Count

481517 bp

Cytosine Count

483133 bp

Genome Length

2746576 bp

Protein-coding Genes

2508 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ferritin dps family proteinFC97_GL002018Not Available+617913 - 61846721136.8
transcription regulatorFC97_GL002019P29284+618481 - 61916725240.3
gntr family transcriptional regulatorFC97_GL002020P96711+619458 - 62054941682.4
d-xylose proton-symporterFC97_GL002021O52733+620789 - 62221051895.9
l-ribulokinaseFC97_GL002022Not Available+622223 - 62383358750.8
l-ribulose-5-phosphate 4-epimeraseFC97_GL002023Not Available+623826 - 62456327143.0
l-arabinose isomeraseFC97_GL002024Q03HQ0+624583 - 62601354299.2
formate nitrite transporter family proteinFC97_GL002025O05399+626265 - 62702927009.8
hypothetical proteinFC97_GL002026Not Available-627059 - 62781128666.4
beta-glucoside-specific phosphotransferase system (pts), iiabc componentFC97_GL002027Not Available+627989 - 62983965358.3

Displaying genes 641 – 650 of 2611 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

126 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da

Displaying 1–10 of 126 metabolites