Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, rpir family | SHLA_78c000130 | Not Available | + | 278051 - 278962 | 33228.2 |
| inositol 2-dehydrogenase idha | SHLA_78c000140 | Not Available | - | 279023 - 280024 | 35698.8 |
| oxidoreductase domain-containing protein | SHLA_78c000150 | Not Available | + | 280152 - 281327 | 41951.2 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase iold | SHLA_78c000160 | Not Available | + | 281418 - 283259 | 65802.7 |
| dna-binding protein, excisionase family | SHLA_78c000170 | Not Available | - | 283348 - 283767 | 14915.2 |
| hypothetical protein | SHLA_78c000180 | Not Available | + | 283839 - 284228 | 14186.9 |
| free methionine-r-sulfoxide reductase msrc | SHLA_78c000190 | Not Available | + | 284333 - 284824 | 17290.8 |
| cell division topological specificity factor mine | SHLA_78c000200 | Not Available | - | 284884 - 285147 | 9678.72 |
| septum site-determining protein mind | SHLA_78c000210 | Not Available | - | 285144 - 285959 | 29108.4 |
| putative septum site-determining protein minc | SHLA_78c000220 | Not Available | - | 285991 - 286761 | 27401.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.