Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail component | SHLA_132c000020 | Not Available | - | 4162119 - 4162514 | 14649.9 |
| Tail component | SHLA_132c000030 | Not Available | - | 4162511 - 4163089 | 21562.0 |
| Dna packaging protein | SHLA_132c000040 | Not Available | - | 4163466 - 4163864 | 14308.9 |
| Capsid component | SHLA_132c000050 | Not Available | - | 4163906 - 4164931 | 38190.4 |
| Head-dna stabilization protein | SHLA_132c000060 | Not Available | - | 4164987 - 4165319 | 11572.5 |
| 23s ribosomal rna | Not Available | Not Available | + | 1 - 2028 | Not Available |
| hypothetical protein | SHLA_252c000010 | Not Available | + | 247 - 471 | 8995.16 |
| 5s ribosomal rna | Not Available | Not Available | + | 946 - 1059 | Not Available |
| 4-hydroxy-2-oxovalerate aldolase bphf | SHLA_2c000020 | Not Available | - | 3251 - 3973 | 25857.9 |
| dimethylmenaquinone methyltransferase | SHLA_2c000030 | Not Available | - | 3966 - 4661 | 24248.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.