Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinoglycan biosynthesis protein exoo | SHLA_16c000860 | Not Available | - | 773242 - 774273 | 36972.6 |
| glycosyltransferase | SHLA_16c000870 | Not Available | - | 774270 - 775199 | 32603.4 |
| glycosyltransferase | SHLA_16c000880 | Not Available | - | 775196 - 776194 | 36319.8 |
| glycosyl transferase 4-like domain-containing protein | SHLA_16c000890 | Not Available | - | 776184 - 777386 | 44034.5 |
| beta-glucanase/beta-glucan synthetase | SHLA_16c000900 | Not Available | - | 777401 - 778186 | 28223.0 |
| putative acyltransferase | SHLA_16c000910 | Not Available | - | 778192 - 779334 | 41804.2 |
| succinoglycan biosynthesis transport protein exot | SHLA_16c000920 | Not Available | - | 779688 - 781160 | 52231.4 |
| succinoglycan biosynthesis protein exow | SHLA_16c000930 | Not Available | + | 781283 - 782242 | 35592.6 |
| succinoglycan biosynthesis protein exov | SHLA_16c000940 | Not Available | + | 782306 - 783253 | 34194.9 |
| hypothetical protein | SHLA_36c000010 | Not Available | + | 784723 - 785226 | 18615.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.