Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase | SHLA_16c000760 | Not Available | + | 759313 - 759771 | 16080.4 |
| lao/ao transport system atpase | SHLA_16c000770 | Not Available | + | 759768 - 760760 | 34543.5 |
| methylmalonyl-coa mutase | SHLA_16c000780 | Not Available | + | 760757 - 762457 | 63353.9 |
| enoyl-coa hydratase/carnithine racemase | SHLA_16c000790 | Not Available | + | 762466 - 763215 | 26804.1 |
| putative crotonobetaine/carnitine-coa ligase caic | SHLA_16c000800 | Not Available | + | 763218 - 764849 | 59058.7 |
| putative ser protein kinase | SHLA_16c000810 | Not Available | + | 764998 - 766947 | 73878.6 |
| hypothetical protein upf0229 | SHLA_16c000820 | Not Available | + | 766973 - 768295 | 50721.3 |
| hypothetical protein | SHLA_16c000830 | Not Available | + | 768309 - 769850 | 59141.0 |
| succinoglycan biosynthesis transport protein exop | SHLA_16c000840 | Not Available | - | 769888 - 772245 | 85304.9 |
| utp--glucose-1-phosphate uridylyltransferase exon | SHLA_16c000850 | Not Available | - | 772332 - 773237 | 32254.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.