Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, xre family | SHLA_16c000660 | Not Available | - | 746569 - 747978 | 52330.3 |
| propionyl-coa carboxylase beta chain | SHLA_16c000670 | Not Available | + | 748099 - 749631 | 55886.0 |
| hypothetical protein | SHLA_16c000680 | Not Available | + | 749646 - 749948 | 10752.4 |
| biotin carboxyl carrier protein/biotin carboxylase | SHLA_16c000690 | Not Available | + | 749948 - 751966 | 72180.9 |
| methylmalonyl-coa mutase | SHLA_16c000700 | Not Available | + | 752007 - 754145 | 77072.3 |
| methylmalonyl-coa epimerase | SHLA_16c000710 | Not Available | + | 754153 - 754554 | 14243.0 |
| arac-type dna-binding domain-containing protein | SHLA_16c000720 | Not Available | - | 754567 - 755565 | 37348.3 |
| abc-type branched-chain amino acid transport system periplasmic component | SHLA_16c000730 | Not Available | + | 755886 - 757004 | 39051.1 |
| transcriptional regulator | SHLA_16c000740 | Not Available | - | 756949 - 757875 | 32968.1 |
| 4-aminobutyrate aminotransferase | SHLA_16c000750 | Not Available | + | 757968 - 759299 | 47126.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.