Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein kinase domain-containing protein | SHLA_16c000560 | Not Available | + | 735383 - 736150 | 27002.9 |
| hypothetical protein | SHLA_16c000570 | Not Available | - | 736290 - 736628 | 12440.2 |
| hypothetical protein | SHLA_16c000580 | Not Available | - | 736658 - 737206 | 19973.5 |
| hypothetical protein | SHLA_16c000590 | Not Available | - | 737211 - 739568 | 86406.8 |
| ubiquinone/menaquinone biosynthesis methyltransferase ubie | SHLA_16c000600 | Not Available | - | 739565 - 740743 | 43733.4 |
| hypothetical protein | SHLA_16c000610 | Not Available | - | 740740 - 741258 | 18811.2 |
| stage ii sporulation protein e | SHLA_16c000620 | Not Available | + | 741470 - 742393 | 33435.3 |
| hypothetical protein | SHLA_16c000630 | Not Available | + | 742695 - 743447 | 26544.7 |
| signal transduction histidine kinase | SHLA_16c000640 | Not Available | + | 743444 - 746191 | 99695.3 |
| response regulator | SHLA_16c000650 | Not Available | + | 746188 - 746559 | 13328.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.