Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase | SHLA_16c000260 | Not Available | + | 698969 - 699754 | 27680.0 |
| succinate semialdehyde dehydrogenase sad | SHLA_16c000270 | Not Available | + | 699751 - 701127 | 48613.3 |
| hypothetical protein | SHLA_16c000280 | Not Available | + | 701136 - 701543 | 14648.3 |
| hypothetical protein | SHLA_16c000290 | Not Available | + | 701555 - 701848 | 10612.7 |
| putative ammonia monooxygenase | SHLA_16c000300 | Not Available | + | 701859 - 702905 | 35651.5 |
| low specificity l-threonine aldolase ltae | SHLA_16c000310 | Not Available | - | 702890 - 703960 | 37041.7 |
| hypothetical protein | SHLA_16c000320 | Not Available | - | 704268 - 705071 | 27669.7 |
| serine phosphatase rsbu | SHLA_16c000330 | Not Available | - | 705264 - 706430 | 41825.3 |
| type vi secretion system lysozyme-like protein | SHLA_16c000340 | Not Available | - | 706541 - 707020 | 18201.8 |
| type vi secretion protein, evpb/vc_a0108 family | SHLA_16c000350 | Not Available | - | 707036 - 708562 | 56166.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.