Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | SHLA_16c000060 | Not Available | - | 678351 - 678785 | 15923.7 |
| hypothetical protein | SHLA_16c000070 | Not Available | - | 678986 - 679270 | 10108.6 |
| copper oxidase | SHLA_16c000080 | Not Available | - | 679288 - 679758 | 16906.5 |
| multicopper oxidase type 3 | SHLA_16c000090 | Not Available | - | 679788 - 681146 | 50112.1 |
| outer membrane protein | SHLA_16c000100 | Not Available | - | 681161 - 682624 | 52633.7 |
| hypothetical protein | SHLA_16c000110 | Not Available | - | 682621 - 682839 | 7457.97 |
| hypothetical protein | SHLA_16c000120 | Not Available | - | 682928 - 683359 | 14887.7 |
| trk-type k+ transport systemmembrane component | SHLA_16c000130 | Not Available | - | 683560 - 685014 | 52217.8 |
| putative protein tyrosine phosphatase | SHLA_16c000140 | Not Available | - | 685160 - 685744 | 21772.2 |
| hypothetical protein | SHLA_16c000150 | Not Available | - | 685892 - 688231 | 84021.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.