Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| camp-binding protein | SHLA_114c000090 | Not Available | + | 666223 - 666984 | 28422.4 |
| dihydroorotase pyrc | SHLA_114c000100 | Not Available | - | 667040 - 668080 | 38041.0 |
| putative fructose transport system kinase | SHLA_114c000110 | Not Available | - | 668197 - 668820 | 23362.1 |
| ribose import atp-binding protein rbsa 1 | SHLA_114c000120 | Not Available | - | 668817 - 669596 | 28183.6 |
| ribose transport system permease protein rbsc | SHLA_114c000130 | Not Available | - | 669596 - 670678 | 37870.0 |
| fad dependent oxidoreductase | SHLA_16c000010 | Not Available | - | 671615 - 673042 | 49840.8 |
| esterase | SHLA_16c000020 | Not Available | - | 673052 - 673684 | 22984.6 |
| diguanylate cyclase | SHLA_16c000030 | Not Available | - | 673909 - 676626 | 96873.4 |
| trap dicarboxylate transporter-dctp subunit | SHLA_16c000040 | Not Available | - | 676637 - 677737 | 39278.2 |
| hypothetical protein | SHLA_16c000050 | Not Available | + | 677985 - 678332 | 12722.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.