Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_41c000690 | Not Available | + | 657479 - 657973 | 17923.4 |
| transposase | SHLA_41c000700 | Not Available | - | 658515 - 658982 | 17831.6 |
| nadp-specific glutamate dehydrogenase gdh | SHLA_114c000010 | Not Available | - | 659703 - 661058 | 48849.4 |
| cbs domain-containing membrane protein | SHLA_114c000020 | Not Available | - | 661148 - 662293 | 39644.5 |
| Trna-leu | Not Available | Not Available | + | 662486 - 662572 | Not Available |
| phosphomannomutase noek | SHLA_114c000040 | Not Available | - | 662709 - 664139 | 48799.5 |
| ba14k-like protein | SHLA_114c000050 | Not Available | + | 664268 - 664663 | 15532.4 |
| selt/selw/selh selenoprotein domain-containing protein | SHLA_114c000060 | Not Available | - | 664716 - 665018 | 11014.2 |
| putative membrane protein | SHLA_114c000070 | Not Available | + | 665198 - 665647 | 15859.7 |
| hypothetical protein | SHLA_114c000080 | Not Available | - | 665638 - 666036 | 14926.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.