Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide/dipeptide abc transporter, atp-binding protein | SHLA_41c000590 | Not Available | + | 647654 - 648682 | 37056.9 |
| abc-type dipeptide transport system periplasmic component | SHLA_41c000600 | Not Available | + | 648679 - 650148 | 54031.8 |
| cytosine deaminase | SHLA_41c000610 | Not Available | + | 650145 - 651611 | 52537.2 |
| dihydrodipicolinate synthase/n-acetyneuraminate lyase | SHLA_41c000620 | Not Available | + | 651620 - 652552 | 34212.5 |
| dehydrogenase | SHLA_41c000630 | Not Available | + | 652549 - 653331 | 27180.6 |
| phenazine biosynthesis protein phzf family | SHLA_41c000640 | Not Available | + | 653401 - 654192 | 28611.1 |
| transposase | SHLA_41c000650 | Not Available | - | 654347 - 655300 | 35920.3 |
| hypothetical protein | SHLA_41c000660 | Not Available | - | 655304 - 655897 | 22940.8 |
| hypothetical protein | SHLA_41c000670 | Not Available | + | 655927 - 656499 | 20534.9 |
| hypothetical protein | SHLA_41c000680 | Not Available | - | 656523 - 657080 | 20743.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.