Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase family protein, vc1184 subfamily | SHLA_41c000490 | Not Available | + | 636889 - 638169 | 47301.2 |
| d-hydantoinase | SHLA_41c000500 | Not Available | + | 638188 - 639588 | 50470.0 |
| transcriptional regulator gntr family | SHLA_41c000510 | Not Available | - | 639810 - 640550 | 27160.6 |
| hypothetical protein | SHLA_41c000520 | Not Available | + | 640690 - 641349 | 22993.9 |
| allantoinase allb | SHLA_41c000530 | Not Available | + | 641349 - 642725 | 49117.9 |
| lactoylglutathione-like lyase | SHLA_41c000540 | Not Available | + | 642722 - 643120 | 14801.8 |
| abc-type dipeptide transport system periplasmic component | SHLA_41c000550 | Not Available | + | 643167 - 644735 | 57916.2 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_41c000560 | Not Available | + | 644842 - 645774 | 34430.4 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_41c000570 | Not Available | + | 645783 - 646655 | 31564.3 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | SHLA_41c000580 | Not Available | + | 646677 - 647657 | 35499.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.