Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| major facilitator transporter | SHLA_41c000390 | Not Available | + | 628976 - 630196 | 41441.9 |
| transcriptional regulator hxlr family | SHLA_41c000400 | Not Available | + | 630314 - 631162 | 30301.4 |
| dihydrofolate reductase | SHLA_41c000410 | Not Available | + | 631203 - 631715 | 19180.7 |
| hypothetical protein | SHLA_41c000420 | Not Available | - | 631712 - 632041 | 11693.3 |
| parb-like domain-containing protein | SHLA_41c000430 | Not Available | - | 631980 - 632765 | 27872.7 |
| transcriptional regulator | SHLA_41c000440 | Not Available | - | 633038 - 633679 | 23858.9 |
| transcriptional regulator | SHLA_41c000450 | Not Available | - | 633710 - 634399 | 25322.5 |
| abc-type amino acid transport periplasmic component | SHLA_41c000460 | Not Available | + | 634585 - 635385 | 28376.0 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | SHLA_41c000470 | Not Available | + | 635454 - 636128 | 23888.2 |
| abc-type polar amino acid transport system atpase component | SHLA_41c000480 | Not Available | + | 636125 - 636862 | 26519.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.