Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | SHLA_41c000290 | Not Available | + | 618798 - 619586 | 29049.0 |
| transposase | SHLA_41c000300 | Not Available | - | 619877 - 620887 | 36873.2 |
| phage integrase family | SHLA_41c000310 | Not Available | - | 621948 - 622400 | 16319.6 |
| acetytransferase | SHLA_41c000320 | Not Available | + | 623137 - 624192 | 38684.2 |
| transcriptional regulator lysr family | SHLA_41c000330 | Not Available | - | 624673 - 625554 | 32611.2 |
| membrane transporter | SHLA_41c000340 | Not Available | + | 625690 - 626010 | 10770.5 |
| membrane transporter | SHLA_41c000350 | Not Available | + | 626059 - 626433 | 13016.0 |
| cytosine/adenosine deaminase | SHLA_41c000360 | Not Available | + | 626433 - 626918 | 17523.8 |
| transcriptional regulator | SHLA_41c000370 | Not Available | - | 627328 - 628248 | 33048.8 |
| nad(p)h dehydrogenase (quinone) | SHLA_41c000380 | Not Available | + | 628350 - 628976 | 21977.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.