Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrolase, peptidase m42 family | SHLA_41c000090 | Not Available | + | 593439 - 594653 | 44064.3 |
| heme-binding protein a | SHLA_41c000100 | Not Available | + | 594810 - 596375 | 57098.6 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_41c000110 | Not Available | + | 596406 - 597353 | 34087.9 |
| oligopeptide abc transport system atp-binding protein oppd | SHLA_41c000120 | Not Available | + | 597350 - 599134 | 62520.5 |
| oligopeptide abc transport system atp-binding protein appf | SHLA_41c000130 | Not Available | + | 599131 - 599928 | 29007.1 |
| transcriptional regulator protein | SHLA_41c000140 | Not Available | + | 599935 - 600738 | 29617.5 |
| hypothetical protein | SHLA_41c000150 | Not Available | - | 600732 - 600920 | 6774.0 |
| asparagine synthetase | SHLA_41c000160 | Not Available | + | 601039 - 602628 | 59200.8 |
| glutathione synthase | SHLA_41c000170 | Not Available | + | 602630 - 604432 | 66299.4 |
| small-conductance mechanosensitive ion channel | SHLA_41c000180 | Not Available | + | 604435 - 606645 | 79608.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.