Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative alpha-2-macroglobulin domain-containing protein | SHLA_49c000520 | Not Available | + | 572626 - 578082 | 195245.0 |
| penicillin-binding protein 1c | SHLA_49c000530 | Not Available | + | 578107 - 580191 | 74767.2 |
| hypothetical protein | SHLA_190c000010 | Not Available | + | 582039 - 582377 | 12264.0 |
| transposase is66 family | SHLA_41c000020 | Not Available | - | 582743 - 583642 | 33525.4 |
| 31 kda immunogenic protein bcsp | SHLA_41c000030 | Not Available | + | 585262 - 586221 | 33662.6 |
| trap transporter, 4tm/12tm fusion protein | SHLA_41c000040 | Not Available | + | 586298 - 588403 | 72821.8 |
| hypothetical protein | SHLA_41c000050 | Not Available | + | 588400 - 588795 | 13707.4 |
| c4-dicarboxylate transport sensor protein dctb | SHLA_41c000060 | Not Available | + | 588853 - 590703 | 66241.3 |
| c4-dicarboxylate transport transcriptional regulatory protein dctd | SHLA_41c000070 | Not Available | + | 590700 - 592061 | 50101.4 |
| hypothetical protein | SHLA_41c000080 | Not Available | + | 592122 - 593405 | 46361.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.