Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative amino acid efflux transmembrane protein | SHLA_49c000420 | Not Available | - | 563652 - 564263 | 21472.2 |
| nucleoid-associated protein | SHLA_49c000430 | Not Available | - | 564298 - 564621 | 11441.1 |
| dna polymerase iii, subunits gamma and tau | SHLA_49c000440 | Not Available | - | 564698 - 566581 | 67477.9 |
| diadenosine tetraphosphate hydrolase | SHLA_49c000450 | Not Available | + | 566811 - 567266 | 16880.3 |
| ntp pyrophosphohydrolase | SHLA_49c000460 | Not Available | + | 567263 - 568237 | 36249.3 |
| hypothetical protein | SHLA_49c000470 | Not Available | - | 568242 - 568439 | 7047.88 |
| prephenate dehydratase | SHLA_49c000480 | Not Available | - | 568579 - 569430 | 31430.9 |
| 3-deoxy-d-manno-octulosonate cytidylyltransferase | SHLA_49c000490 | Not Available | - | 569443 - 570198 | 27195.7 |
| cytochrome c | SHLA_49c000500 | Not Available | + | 570350 - 571102 | 24811.7 |
| putative permease | SHLA_49c000510 | Not Available | - | 571174 - 572118 | 32886.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.