Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase b | SHLA_49c000320 | Not Available | - | 551893 - 552828 | 33822.5 |
| ribosome-binding factor a | SHLA_49c000330 | Not Available | - | 552841 - 553251 | 15428.4 |
| translation initiation factor if-2 | SHLA_49c000340 | Not Available | - | 553324 - 555984 | 96501.9 |
| hypothetical protein | SHLA_49c000350 | Not Available | - | 556089 - 556745 | 23218.9 |
| transcription termination/antitermination protein nusa | SHLA_49c000360 | Not Available | - | 556821 - 558419 | 59441.3 |
| ribosome maturation factor rimp | SHLA_49c000370 | Not Available | - | 558553 - 559164 | 22264.3 |
| putative transmembrane transport protein | SHLA_49c000380 | Not Available | + | 559422 - 561050 | 58394.1 |
| membrane-bound lytic murein transglycosylase b | SHLA_49c000390 | Not Available | - | 561108 - 562364 | 44677.6 |
| recombination protein recr | SHLA_49c000400 | Not Available | - | 562374 - 562979 | 21342.0 |
| mosc domain-containing protein | SHLA_49c000410 | Not Available | + | 563037 - 563651 | 22160.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.