Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase 1 | SHLA_49c000220 | Not Available | + | 542004 - 543227 | 43153.8 |
| enoyl-[acyl-carrier-protein] reductase 2 | SHLA_49c000230 | Not Available | + | 543233 - 544039 | 28640.3 |
| hypothetical protein | SHLA_49c000240 | Not Available | - | 544084 - 544311 | 8078.13 |
| amino acid transporter lyse | SHLA_49c000250 | Not Available | - | 544378 - 544977 | 20413.3 |
| transcriptional regulator azlb | SHLA_49c000260 | Not Available | + | 545107 - 545565 | 17262.1 |
| ribosomal rna small subunit methyltransferase c | SHLA_49c000270 | Not Available | - | 545569 - 546609 | 38267.1 |
| polyribonucleotide nucleotidyltransferase pnp | SHLA_49c000280 | Not Available | - | 546724 - 548865 | 77166.8 |
| 30s ribosomal protein s15 | SHLA_49c000290 | Not Available | - | 549218 - 549487 | 10083.2 |
| bacterial sh3 domain-containing protein | SHLA_49c000300 | Not Available | - | 549639 - 549968 | 11487.7 |
| blue-light-activated histidine kinase | SHLA_49c000310 | Not Available | - | 550012 - 551703 | 61404.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.