Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative regulator of ribonuclease activity | SHLA_91c000090 | Not Available | - | 514014 - 514508 | 17580.9 |
| d-3-phosphoglycerate dehydrogenase sera | SHLA_91c000100 | Not Available | - | 514505 - 515482 | 35217.7 |
| malate dehydrogenase mdh | SHLA_91c000110 | Not Available | - | 515486 - 516571 | 38029.9 |
| putative transcriptional regulator, lysr family | SHLA_91c000120 | Not Available | - | 516690 - 517586 | 32146.4 |
| putative ammonia monooxygenase | SHLA_91c000130 | Not Available | - | 517880 - 519022 | 39192.6 |
| transcriptional regulator, gntr family | SHLA_91c000140 | Not Available | + | 519108 - 519764 | 24162.8 |
| hypothetical protein | SHLA_91c000150 | Not Available | - | 519797 - 521194 | 50083.3 |
| 3-methylitaconate isomerase mii | SHLA_91c000160 | Not Available | - | 521191 - 522345 | 40130.0 |
| sulfite exporter taue/safe | SHLA_91c000170 | Not Available | - | 522374 - 523111 | 26309.1 |
| glyoxylate reductase gyar | SHLA_49c000010 | Not Available | - | 523307 - 524338 | 37009.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.