Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | SHLA_93c000170 | Not Available | + | 500943 - 501509 | 20776.8 |
| hypothetical protein | SHLA_93c000180 | Not Available | - | 501529 - 502287 | 27406.4 |
| alkaline phosphatase phoa | SHLA_91c000010 | Not Available | - | 503346 - 505100 | 62810.1 |
| hypothetical protein | SHLA_91c000020 | Not Available | - | 505212 - 505826 | 22317.2 |
| fad-dependent pyridine nucleotide-disulfide oxidoreductase | SHLA_91c000030 | Not Available | - | 506009 - 507172 | 41925.9 |
| transcriptional regulator | SHLA_91c000040 | Not Available | - | 507278 - 508189 | 33693.8 |
| tricarboxylate transport protein tctc | SHLA_91c000050 | Not Available | + | 508365 - 509465 | 39460.0 |
| hypothetical protein | SHLA_91c000060 | Not Available | + | 509605 - 511629 | 71018.0 |
| 4-oxalomesaconate tautomerase gald | SHLA_91c000070 | Not Available | + | 511723 - 512829 | 38179.3 |
| 3-isopropylmalate dehydrogenase leub | SHLA_91c000080 | Not Available | + | 512883 - 513941 | 37745.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.