Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein c | SHLA_93c000070 | Not Available | + | 492282 - 492587 | 11295.5 |
| putative conjugal transfer protein trag | SHLA_93c000080 | Not Available | + | 492584 - 494248 | 59935.7 |
| hypothetical protein | SHLA_93c000090 | Not Available | - | 494521 - 494817 | 10404.5 |
| putative atpase, para type | SHLA_93c000100 | Not Available | - | 494854 - 495477 | 21282.4 |
| plasmid stabilization system protein | SHLA_93c000110 | Not Available | - | 495545 - 495850 | 11516.5 |
| putative transcriptional regulator | SHLA_93c000120 | Not Available | - | 495847 - 496116 | 9780.82 |
| helix-turn-helix domain-containing protein | SHLA_93c000130 | Not Available | - | 496394 - 497272 | 32597.8 |
| site-specific recombinase | SHLA_93c000140 | Not Available | - | 497782 - 498375 | 21621.1 |
| uridine kinase | SHLA_93c000150 | Not Available | + | 498490 - 499101 | 22851.1 |
| antiseptic resistance protein qaca | SHLA_93c000160 | Not Available | + | 499421 - 500932 | 51697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.