Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | SHLA_38c000270 | Not Available | - | 7592496 - 7593032 | 19852.6 |
| hypothetical protein | SHLA_38c000280 | Not Available | - | 7593032 - 7593202 | 6058.44 |
| oligopeptide abc transport system atp-binding protein appf | SHLA_38c000290 | Not Available | - | 7593520 - 7594518 | 36446.0 |
| putative peptide abc transporter atp-binding protein y4tr | SHLA_38c000300 | Not Available | - | 7594515 - 7595474 | 34620.4 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_38c000310 | Not Available | - | 7595471 - 7596442 | 35826.8 |
| oligopeptide abc transport system permease protein oppc | SHLA_38c000320 | Not Available | - | 7596442 - 7597458 | 36020.9 |
| abc-type dipeptide transport system, periplasmic component | SHLA_38c000330 | Not Available | - | 7597480 - 7599141 | 60185.4 |
| l-amino acid amidase laaa | SHLA_38c000340 | Not Available | - | 7599167 - 7600072 | 33256.3 |
| putative cytosol aminopeptidase | SHLA_38c000350 | Not Available | - | 7600094 - 7601608 | 53159.0 |
| transcriptional regulator | SHLA_38c000360 | Not Available | + | 7601868 - 7602770 | 33660.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.