Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-aminohexanoate-dimer hydrolase nylb | SHLA_38c000170 | Not Available | - | 7583287 - 7584468 | 43369.1 |
| spermidine/putrescine-binding periplasmic protein potd | SHLA_38c000180 | Not Available | - | 7584546 - 7585586 | 38692.2 |
| putrescine transport system permease protein poti | SHLA_38c000190 | Not Available | - | 7585623 - 7586426 | 29706.7 |
| spermidine/putrescine transport system permease protein potb | SHLA_38c000200 | Not Available | - | 7586419 - 7587342 | 34069.6 |
| spermidine/putrescine import atp-binding protein pota | SHLA_38c000210 | Not Available | - | 7587345 - 7588445 | 39822.8 |
| gntr family transcriptional regulator | SHLA_38c000220 | Not Available | + | 7588703 - 7589389 | 25385.6 |
| hypothetical protein | SHLA_38c000230 | Not Available | + | 7589509 - 7589676 | 6422.93 |
| hypothetical protein | SHLA_38c000240 | Not Available | + | 7589709 - 7590173 | 16766.8 |
| glutamate synthase domain-containing protein | SHLA_38c000250 | Not Available | - | 7590256 - 7591914 | 59879.0 |
| hypothetical protein | SHLA_38c000260 | Not Available | - | 7592072 - 7592281 | 7641.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.