Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase aspc | SHLA_38c000070 | Not Available | - | 7572271 - 7573443 | 41595.9 |
| glycine cleavage system transcriptional activator | SHLA_38c000080 | Not Available | - | 7573461 - 7574477 | 36912.2 |
| guanidinobutyrase | SHLA_38c000090 | Not Available | + | 7574660 - 7575712 | 37453.8 |
| spermidine/putrescine-binding periplasmic protein | SHLA_38c000100 | Not Available | + | 7575781 - 7576869 | 39495.0 |
| abc-type spermidine/putrescine transport systematpase component | SHLA_38c000110 | Not Available | + | 7576951 - 7577985 | 36456.7 |
| spermidine/putrescine transport system permease protein potb | SHLA_38c000120 | Not Available | + | 7577982 - 7578836 | 31158.1 |
| putative sulfate transport system permease protein cyst | SHLA_38c000130 | Not Available | + | 7578833 - 7579630 | 28785.8 |
| hypothetical protein upf0012 | SHLA_38c000140 | Not Available | + | 7579849 - 7580631 | 27265.4 |
| eama-like transporter family | SHLA_38c000150 | Not Available | - | 7580637 - 7581515 | 29779.7 |
| amidohydrolase 3 | SHLA_38c000160 | Not Available | - | 7581596 - 7583266 | 60537.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.