Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase is3/is911 family protein | SHLA_108c000100 | Not Available | + | 478048 - 478665 | 23504.1 |
| hypothetical protein | SHLA_108c000110 | Not Available | - | 479219 - 479680 | 17226.3 |
| atpases involved in chromosome partitioning | SHLA_108c000120 | Not Available | + | 480445 - 481128 | 24318.1 |
| hypothetical protein | SHLA_108c000130 | Not Available | + | 481128 - 481436 | 11452.7 |
| hemolysin-type calcium-binding repeat-containing protein | SHLA_108c000140 | Not Available | + | 481663 - 482790 | 39771.3 |
| uridine kinase | SHLA_93c000020 | Not Available | + | 484599 - 485210 | 22851.1 |
| arabinose efflux permease | SHLA_93c000030 | Not Available | + | 485530 - 487041 | 51697.9 |
| transcriptional regulator tetr family | SHLA_93c000040 | Not Available | + | 487052 - 487618 | 20776.8 |
| hypothetical protein | SHLA_93c000050 | Not Available | - | 487638 - 488396 | 27406.4 |
| putative conjugal transfer protein traa | SHLA_93c000060 | Not Available | - | 488408 - 492010 | 134175.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.