Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lactate dehydrogenase | SHLA_39c000620 | Not Available | - | 7535128 - 7536576 | 51006.7 |
| hypothetical protein | SHLA_39c000630 | Not Available | - | 7536793 - 7537632 | 29683.9 |
| transcriptional regulator, rpir family | SHLA_39c000640 | Not Available | + | 7537724 - 7538608 | 30802.3 |
| acetylornithine transaminase | SHLA_39c000650 | Not Available | + | 7538605 - 7539942 | 47699.5 |
| glutamine-binding periplasmic protein glnh | SHLA_39c000660 | Not Available | + | 7539964 - 7540704 | 27093.4 |
| glutamine transport system permease protein glnp | SHLA_39c000670 | Not Available | + | 7540819 - 7541475 | 23602.0 |
| glutamine transport atp-binding protein glnq | SHLA_39c000680 | Not Available | + | 7541472 - 7542200 | 26666.6 |
| peptidase c45 acyl-coenzyme a:6-aminopenicillanic acid acyl-transferase | SHLA_39c000690 | Not Available | + | 7542190 - 7543233 | 38031.4 |
| l-fuconate dehydratase | SHLA_39c000700 | Not Available | - | 7543278 - 7544552 | 47005.6 |
| 2-keto-3-deoxy-l-fuconate dehydrogenase | SHLA_39c000710 | Not Available | - | 7544583 - 7545317 | 25421.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.