Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pseudoazurin | SHLA_39c000520 | Not Available | - | 7525235 - 7525684 | 16199.7 |
| fe(3+) dicitrate transport atp-binding protein fece | SHLA_39c000530 | Not Available | - | 7525681 - 7526484 | 28875.1 |
| cobalamin import system permease protein btuc | SHLA_39c000540 | Not Available | - | 7526481 - 7527509 | 34745.9 |
| fe iii abc transporter, periplasmic-binding protein | SHLA_39c000550 | Not Available | - | 7527506 - 7528549 | 37021.2 |
| transcriptional regulator, rpir family | SHLA_39c000560 | Not Available | - | 7528965 - 7529819 | 31571.0 |
| spermidine/putrescine-binding periplasmic protein potd | SHLA_39c000570 | Not Available | - | 7529876 - 7530946 | 39561.5 |
| spermidine/putrescine import atp-binding protein pota | SHLA_39c000580 | Not Available | + | 7531111 - 7532193 | 39207.1 |
| abc-type spermidine/putrescine transport system permease component i | SHLA_39c000590 | Not Available | + | 7532195 - 7533097 | 32946.8 |
| abc-type spermidine/putrescine transport system permease component ii | SHLA_39c000600 | Not Available | + | 7533109 - 7533939 | 30625.4 |
| l-aminopeptidase dmpa | SHLA_39c000610 | Not Available | + | 7533941 - 7535077 | 40480.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.