Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | SHLA_39c000020 | Not Available | + | 7470005 - 7471624 | 56789.3 |
| putative hydrolase of the alpha/beta superfamily | SHLA_39c000030 | Not Available | - | 7471608 - 7473293 | 59997.5 |
| coenzyme f390 synthetase | SHLA_39c000040 | Not Available | - | 7473529 - 7474947 | 52648.0 |
| glycosyltransferase | SHLA_39c000050 | Not Available | - | 7474944 - 7476059 | 40009.7 |
| hypothetical protein | SHLA_39c000060 | Not Available | - | 7476473 - 7476634 | 5655.93 |
| putative mannose-6-phosphate isomerase | SHLA_39c000070 | Not Available | + | 7477085 - 7478326 | 46797.9 |
| hypothetical protein duf3307 | SHLA_39c000080 | Not Available | + | 7478461 - 7478868 | 14868.5 |
| gdp-mannose 6-dehydrogenase algd | SHLA_39c000090 | Not Available | + | 7479142 - 7480410 | 45975.4 |
| glycosyltransferase | SHLA_39c000100 | Not Available | + | 7480422 - 7481672 | 46487.1 |
| heparinase ii/iii-like protein | SHLA_39c000110 | Not Available | + | 7481790 - 7483739 | 69918.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.