Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| quinolinate synthase a | SHLA_14c001260 | Not Available | + | 468544 - 469623 | 39642.9 |
| transposase | SHLA_108c000010 | Not Available | - | 469894 - 470586 | 25809.7 |
| transposase | SHLA_108c000020 | Not Available | - | 471111 - 471578 | 17048.4 |
| transposase | SHLA_108c000030 | Not Available | - | 471655 - 471999 | 12672.6 |
| transposase | SHLA_108c000040 | Not Available | - | 471996 - 472265 | 9476.47 |
| hypothetical protein | SHLA_108c000050 | Not Available | + | 472727 - 474124 | 49713.4 |
| hypothetical protein | SHLA_108c000060 | Not Available | - | 474345 - 474443 | 3442.37 |
| ti-type conjugative transfer system protein trag | SHLA_108c000070 | Not Available | + | 474720 - 476102 | 50719.9 |
| putative nucleotidyltransferase | SHLA_108c000080 | Not Available | + | 476089 - 477009 | 34952.7 |
| putative transcriptional regulator | SHLA_108c000090 | Not Available | - | 477234 - 477644 | 14920.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.