Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative amino-acid abc transporter periplasmic-binding protein y4te | SHLA_89c000050 | Not Available | + | 7376940 - 7377791 | 30080.2 |
| putative amino-acid abc transporter permease protein y4tf | SHLA_89c000060 | Not Available | + | 7377860 - 7378519 | 23725.8 |
| putative amino-acid abc transporter permease protein y4tg | SHLA_89c000070 | Not Available | + | 7378522 - 7379184 | 24703.9 |
| ectoine utilization protein euta | SHLA_89c000080 | Not Available | + | 7379184 - 7379963 | 27731.7 |
| reactive intermediate/imine deaminase | SHLA_89c000090 | Not Available | + | 7380002 - 7380379 | 12969.5 |
| cysteine synthase | SHLA_89c000100 | Not Available | + | 7380398 - 7381537 | 41638.2 |
| hypothetical protein | SHLA_89c000110 | Not Available | - | 7381592 - 7381846 | 9669.62 |
| abc-type polar amino acid transport system atpase component | SHLA_89c000120 | Not Available | - | 7381800 - 7382393 | 21894.4 |
| formimidoylglutamase hutg | SHLA_89c000130 | Not Available | - | 7382420 - 7383364 | 33339.8 |
| glutamine transport atp-binding protein glnq | SHLA_89c000140 | Not Available | - | 7383410 - 7384183 | 28185.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.