Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ti-type conjugative transfer relaxase traa | SHLA_65c000090 | Not Available | + | 7317704 - 7322323 | 169679.0 |
| hypothetical protein | SHLA_65c000100 | Not Available | + | 7322355 - 7322624 | 9931.81 |
| hypothetical protein | SHLA_65c000110 | Not Available | + | 7322627 - 7325098 | 90906.5 |
| transcriptional regulator | SHLA_65c000120 | Not Available | - | 7325320 - 7326186 | 31643.3 |
| nadph:quinone reductase | SHLA_65c000130 | Not Available | + | 7326256 - 7327227 | 33729.9 |
| hypothetical protein | SHLA_65c000140 | Not Available | - | 7327258 - 7327614 | 13420.2 |
| n-acyl-l-homoserine lactone synthetase | SHLA_65c000150 | Not Available | - | 7327675 - 7328340 | 25009.9 |
| heme-binding protein a | SHLA_65c000160 | Not Available | + | 7328920 - 7330512 | 57624.1 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_65c000170 | Not Available | + | 7330515 - 7331489 | 34609.2 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_65c000180 | Not Available | + | 7331506 - 7332378 | 30801.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.