Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell wall endopeptidase, family m23/m37 | SHLA_21c000620 | Not Available | - | 7267970 - 7268884 | 32664.3 |
| tigr02588 family protein | SHLA_21c000630 | Not Available | - | 7268995 - 7269405 | 14681.4 |
| dead-box atp-dependent rna helicase csha | SHLA_21c000640 | Not Available | - | 7270330 - 7272273 | 71505.5 |
| pantothenate synthetase panc | SHLA_21c000650 | Not Available | + | 7272555 - 7273424 | 31573.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase panb | SHLA_21c000660 | Not Available | + | 7273426 - 7274250 | 29232.5 |
| putative branched-chain amino acid permease (azaleucine resistance) protein | SHLA_21c000670 | Not Available | + | 7274433 - 7275167 | 25896.7 |
| putative membrane protein | SHLA_21c000680 | Not Available | + | 7275170 - 7275481 | 10879.9 |
| aminopeptidase p-like protein | SHLA_21c000690 | Not Available | - | 7275471 - 7277306 | 65777.6 |
| hypothetical protein | SHLA_21c000700 | Not Available | - | 7277470 - 7277994 | 19807.6 |
| ribosomal protein l11 methyltransferase prma | SHLA_21c000710 | Not Available | - | 7278424 - 7279305 | 32077.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.