Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan synthase ftsi | SHLA_21c000420 | Not Available | + | 7241151 - 7242899 | 62595.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase mure | SHLA_21c000430 | Not Available | + | 7242964 - 7244415 | 50533.3 |
| putative udp-n-acetylmuramoyl-tripeptide--d-alanyl-d-alanine ligase murf | SHLA_21c000440 | Not Available | + | 7244412 - 7245845 | 50197.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase mray | SHLA_21c000450 | Not Available | + | 7245963 - 7247063 | 38731.3 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase murd | SHLA_21c000460 | Not Available | + | 7247071 - 7248468 | 48248.6 |
| lipid ii flippase ftsw | SHLA_21c000470 | Not Available | + | 7248536 - 7249690 | 42055.5 |
| udp-n-acetylglucosamine--n-acetylglucosamine transferase murg | SHLA_21c000480 | Not Available | + | 7249700 - 7250836 | 39566.1 |
| udp-n-acetylmuramate--l-alanine ligase murc | SHLA_21c000490 | Not Available | + | 7250833 - 7252248 | 50473.7 |
| udp-n-acetylenolpyruvoylglucosamine reductase murb | SHLA_21c000500 | Not Available | + | 7252245 - 7253219 | 34951.1 |
| aquaporin z 1 | SHLA_21c000510 | Not Available | + | 7253344 - 7254093 | 25250.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.