Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease 3 | SHLA_14c001060 | Not Available | + | 446085 - 446804 | 26318.3 |
| gtp-binding protein era | SHLA_14c001070 | Not Available | + | 446813 - 447757 | 34969.0 |
| putative glycerophosphoryl diester phosphodiesterase | SHLA_14c001080 | Not Available | - | 447762 - 448727 | 34547.1 |
| biofilm architecture maintenance protein mbaa | SHLA_14c001090 | Not Available | - | 448797 - 451160 | 87523.4 |
| norspermidine sensor | SHLA_14c001100 | Not Available | - | 451147 - 452196 | 38063.1 |
| putative rna-binding transcriptional regulator | SHLA_14c001110 | Not Available | + | 452428 - 454737 | 83424.3 |
| beta-lactamase blap | SHLA_14c001120 | Not Available | + | 454885 - 455778 | 31326.5 |
| regulatory protein arsr | SHLA_14c001130 | Not Available | - | 455822 - 456145 | 12117.6 |
| putative transmembrane protein | SHLA_14c001140 | Not Available | + | 456219 - 456707 | 18080.5 |
| hypothetical protein | SHLA_14c001150 | Not Available | + | 456723 - 457085 | 13302.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.