Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| soluble lytic murein transglycosylase | SHLA_21c000320 | Not Available | - | 7231534 - 7232463 | 31885.0 |
| putative threonine efflux protein | SHLA_21c000330 | Not Available | - | 7232596 - 7233225 | 22017.4 |
| pyrophosphate-dependent phosphofructokinase | SHLA_21c000340 | Not Available | - | 7233310 - 7234524 | 43414.0 |
| molecular chaperone, dnaj family | SHLA_21c000350 | Not Available | + | 7234674 - 7235504 | 30578.5 |
| n-acetylmuramoyl-l-alanine amidase amid | SHLA_21c000360 | Not Available | + | 7235501 - 7236265 | 27523.5 |
| lytic transglycosylase | SHLA_21c000370 | Not Available | + | 7236491 - 7237153 | 23760.8 |
| fad dependent oxidoreductase | SHLA_21c000380 | Not Available | + | 7237227 - 7238408 | 42037.0 |
| protein mraz | SHLA_21c000390 | Not Available | + | 7239266 - 7239706 | 16316.5 |
| ribosomal rna small subunit methyltransferase h | SHLA_21c000400 | Not Available | + | 7239721 - 7240746 | 35777.8 |
| hypothetical protein | SHLA_21c000410 | Not Available | + | 7240750 - 7241151 | 15019.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.