Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylase involved in ubiquinone/menaquinone biosynthesis | SHLA_21c000220 | Not Available | + | 7220596 - 7221603 | 36974.4 |
| 5,10-methylenetetrahydrofolate reductase | SHLA_21c000230 | Not Available | + | 7221605 - 7222507 | 31987.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | SHLA_21c000240 | Not Available | - | 7223001 - 7223927 | 32468.9 |
| membrane-bound lytic murein transglycosylase b | SHLA_21c000250 | Not Available | - | 7224081 - 7225277 | 42929.2 |
| lyzozyme m1 | SHLA_21c000260 | Not Available | - | 7225450 - 7226316 | 32614.1 |
| 25 kda outer-membrane immunogenic protein | SHLA_21c000270 | Not Available | - | 7226420 - 7227088 | 23695.2 |
| diguanylate cyclase | SHLA_21c000280 | Not Available | + | 7227321 - 7228883 | 57320.9 |
| penicillin-binding protein, beta-lactamase class c | SHLA_21c000290 | Not Available | + | 7228948 - 7230354 | 49942.4 |
| hypothetical protein | SHLA_21c000300 | Not Available | - | 7230339 - 7230740 | 15045.5 |
| acetytransferase (gnat) family | SHLA_21c000310 | Not Available | + | 7230924 - 7231511 | 22287.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.