Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cellulase family protein | SHLA_21c000120 | Not Available | - | 7208113 - 7209315 | 43698.8 |
| hypothetical protein | SHLA_21c000130 | Not Available | - | 7209512 - 7210918 | 50149.7 |
| hypothetical protein | SHLA_21c000140 | Not Available | + | 7211253 - 7212107 | 30296.8 |
| hypothetical protein | SHLA_21c000150 | Not Available | + | 7212268 - 7212606 | 12011.3 |
| acetolactate synthase isozyme 2 large subunit | SHLA_21c000160 | Not Available | - | 7212792 - 7214441 | 59939.6 |
| putative acyl-coa transferase/carnitine dehydratase | SHLA_21c000170 | Not Available | - | 7214438 - 7215634 | 42258.5 |
| putative permease, dmt superfamily | SHLA_21c000180 | Not Available | - | 7215805 - 7216752 | 33840.9 |
| lysophospholipase protein | SHLA_21c000190 | Not Available | - | 7216749 - 7217708 | 34469.0 |
| ribonuclease, t2 family | SHLA_21c000200 | Not Available | + | 7217883 - 7218593 | 24793.0 |
| atp-binding cassette protein, chvd family | SHLA_21c000210 | Not Available | + | 7218797 - 7220446 | 60746.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.