Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator rpir family | SHLA_21c000020 | Not Available | - | 7196176 - 7197054 | 32376.8 |
| putative n-formylglutamate amidohydrolase | SHLA_21c000030 | Not Available | + | 7197246 - 7198007 | 27247.8 |
| trap-type mannitol/chloroaromatic compound transport system small permease component | SHLA_21c000040 | Not Available | + | 7198140 - 7198649 | 19199.8 |
| sialic acid trap transporter permease protein siat | SHLA_21c000050 | Not Available | + | 7198646 - 7199968 | 47804.0 |
| trap dicarboxylate transporter-dctp subunit | SHLA_21c000060 | Not Available | + | 7200098 - 7201153 | 38253.3 |
| glutamine synthetase glna | SHLA_21c000070 | Not Available | + | 7201227 - 7202597 | 51360.8 |
| succinate-semialdehyde dehydrogenase | SHLA_21c000080 | Not Available | + | 7202713 - 7204092 | 49987.6 |
| nad-dependent methanol dehydrogenase mdh | SHLA_21c000090 | Not Available | + | 7204092 - 7205237 | 40274.6 |
| atpases involved in chromosome partitioning | SHLA_21c000100 | Not Available | + | 7205457 - 7206173 | 25898.5 |
| chemoreceptor mcpa | SHLA_21c000110 | Not Available | + | 7206430 - 7207953 | 54074.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.