Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative rhizopine-binding protein mocb | SHLA_34c000790 | Not Available | + | 7185920 - 7186933 | 35458.1 |
| bifunctional deaminase-reductase domain-containing protein | SHLA_34c000800 | Not Available | - | 7187028 - 7187558 | 19699.4 |
| hypothetical protein | SHLA_34c000810 | Not Available | + | 7187776 - 7188081 | 11048.7 |
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase | SHLA_34c000820 | Not Available | - | 7188442 - 7189950 | 54164.6 |
| pyrimidine-specific ribonucleoside hydrolase riha | SHLA_34c000830 | Not Available | - | 7189947 - 7190885 | 33976.6 |
| glyoxalase/bleomycin resistance protein/dioxygenase | SHLA_34c000840 | Not Available | - | 7190882 - 7191307 | 15331.3 |
| inner-membrane translocator | SHLA_34c000850 | Not Available | - | 7191316 - 7192209 | 30499.4 |
| putative abc transporter, permease | SHLA_34c000860 | Not Available | - | 7192206 - 7193243 | 35652.6 |
| monosaccharide-transporting atpase | SHLA_34c000870 | Not Available | - | 7193240 - 7194820 | 55754.4 |
| abc-type fe3+ transport system periplasmic component | SHLA_21c000010 | Not Available | - | 7194969 - 7196072 | 38821.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.