Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase beta | SHLA_34c000690 | Not Available | + | 7173915 - 7175513 | 58216.6 |
| ubic transcription regulator | SHLA_34c000700 | Not Available | + | 7175606 - 7176364 | 27664.9 |
| glucokinase glck | SHLA_34c000710 | Not Available | + | 7176373 - 7177341 | 32848.4 |
| glucosamine--fructose-6-phosphate aminotransferase | SHLA_34c000720 | Not Available | + | 7177352 - 7178410 | 36892.8 |
| d-tagatose-1,6-bisphosphate aldolase subunit kbaz | SHLA_34c000730 | Not Available | - | 7178499 - 7179767 | 45772.7 |
| putative pfkb family sugar kinase | SHLA_34c000740 | Not Available | - | 7179767 - 7180744 | 34031.4 |
| xylose repressor | SHLA_34c000750 | Not Available | - | 7180779 - 7181990 | 42191.8 |
| sugar phosphate isomerase/epimerase | SHLA_34c000760 | Not Available | - | 7182057 - 7182878 | 29847.4 |
| putative ribose/galactose/methyl galactoside import atp-binding protein | SHLA_34c000770 | Not Available | + | 7183351 - 7184874 | 54993.9 |
| ribose transport system permease protein rbsc | SHLA_34c000780 | Not Available | + | 7184905 - 7185873 | 33120.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.