Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter, periplasmic spermidine/putrescine-binding protein | SHLA_34c000590 | Not Available | + | 7163246 - 7164262 | 37434.2 |
| endoribonuclease l-psp | SHLA_34c000600 | Not Available | + | 7164320 - 7164742 | 15628.8 |
| hypothetical protein | SHLA_34c000610 | Not Available | + | 7164754 - 7165431 | 23265.6 |
| acetylornithine deacetylase arge | SHLA_34c000620 | Not Available | + | 7165435 - 7166595 | 41065.1 |
| benzoate membrane transport protein bene | SHLA_34c000630 | Not Available | - | 7166606 - 7167847 | 42653.2 |
| putative rhizopine catabolism regulatory protein mocr | SHLA_34c000640 | Not Available | + | 7167958 - 7169448 | 54060.6 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc 2 | SHLA_34c000650 | Not Available | - | 7169520 - 7170596 | 38641.6 |
| abc-type sugar transport system permease component | SHLA_34c000660 | Not Available | - | 7170624 - 7171445 | 29953.5 |
| abc-type sugar transport system permease component | SHLA_34c000670 | Not Available | - | 7171442 - 7172305 | 31479.5 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SHLA_34c000680 | Not Available | - | 7172371 - 7173702 | 48190.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.