Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_34c000490 | Not Available | - | 7150599 - 7151423 | 29414.8 |
| terc family transporter | SHLA_34c000500 | Not Available | - | 7151534 - 7152145 | 21299.9 |
| putative succinate-semialdehyde dehydrogenase | SHLA_34c000510 | Not Available | + | 7152522 - 7153997 | 52764.1 |
| putative flavoprotein involved in k+ transport | SHLA_34c000520 | Not Available | + | 7154206 - 7155453 | 45250.8 |
| transcriptional regulator | SHLA_34c000530 | Not Available | + | 7155498 - 7156571 | 39381.4 |
| aldehyde dehydrogenase puuc | SHLA_34c000540 | Not Available | + | 7156568 - 7158049 | 53081.0 |
| trimethylamine dehydrogenase tmd | SHLA_34c000550 | Not Available | + | 7158317 - 7160398 | 76714.4 |
| spermidine/putrescine import atp-binding protein pota | SHLA_34c000560 | Not Available | + | 7160409 - 7161494 | 39226.1 |
| spermidine/putrescine transport system permease protein potb | SHLA_34c000570 | Not Available | + | 7161491 - 7162420 | 33805.4 |
| spermidine/putrescine transport system permease protein potc | SHLA_34c000580 | Not Available | + | 7162417 - 7163226 | 28919.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.